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Commit db3552fd authored by Jacob Durrant's avatar Jacob Durrant
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Improved molecule editing/converting, etc.

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CHANGELOG.md
View file @ db3552fd
Changes
=======
WIP
---
* Updated copyright notices.
* Created a separate, independent helper app called PDBQTConvert that can
convert files in many other formats (e.g., PDB, XYZ, CAN, SMI) to PDBQT (see
`pdbqt_convert/`). This app uses
[openbabel.js](https://github.com/partridgejiang/cheminfo-to-web/)
and is GNU GPL licensed. We distribute it alongside Webina, but as a
separate program.
* Modified Webina so users can optionally use PDBQTConvert to convert their
files. Webina communicates with PDBQTConvert at "arms length," via an
iframe.
* Added the ability to draw small-molecule ligands using the [PubChem
Sketcher](https://pubchem.ncbi.nlm.nih.gov/edit3/index.html) provided by the
NIH (embedded via an iframe).
1.0.0
-----
The initial version released with the publication.
* The initial version.
* Apache License 2.0.
dist/Webina/Webina.js deleted 100644 → 0
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/**
* Webina Copyright 2019 Jacob Durrant
*
* Licensed under the Apache License, Version 2.0 (the License);
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an AS IS BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
// This file is part of Webina, released under the Apache 2.0 License. See
// LICENSE.md or go to https://opensource.org/licenses/Apache-2.0 for full
// details. Copyright 2019 Jacob D. Durrant.
// There are a few variables and functions from vina.js that I want to easily
// access from here.
var VERSION = "1.0.0"; // Replaced by compile script.
console.log("Webina Library " + VERSION);
console.log(" Compiled from Vina 1.1.2 codebase:");
console.log(" http://vina.scripps.edu/");
var WEBINA_Module;
// A shiv for decodeBase64.
var decodeBase64 = "function" == typeof atob ? atob : function (r) {
var e, t, a, i, n, o, f = "ABCDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmnopqrstuvwxyz0123456789+/=", m = "", s = 0;
for (r = r.replace(/[^A-Za-z0-9\+\/\=]/g, ""); e = f.indexOf(r.charAt(s++)) << 2 | (i = f.indexOf(r.charAt(s++))) >> 4, t = (15 & i) << 4 | (n = f.indexOf(r.charAt(s++))) >> 2, a = (3 & n) << 6 | (o = f.indexOf(r.charAt(s++))), m += String.fromCharCode(e), 64 !== n && (m += String.fromCharCode(t)), 64 !== o && (m += String.fromCharCode(a)), s < r.length;)
return m;
};
// Make Webina global namespace.
var Webina = (function () {
return {
WEBINA_ENVIRONMENT_IS_NODE: window["WEBINA_ENVIRONMENT_IS_NODE"],
WEBINA_lengthBytesUTF8: window["WEBINA_lengthBytesUTF8"],
WEBINA_stringToUTF8Array: window["WEBINA_stringToUTF8Array"],
WEBINA_assert: window["WEBINA_assert"],
WEBINA_ASSERTIONS: 1,
WEBINA_DATA_URI_PREFIX: "data:application/octet-stream;base64,",
WEBINA_BASE_URL: "./",
FS: window["FS"],
start: function start(vinaParams, receptorPDBQTTxt, ligandPDBQTTxt, onDone, onError, baseUrl) {
var _this = this;
// baseUrl = undefined; // For debugging.
var baseUrlMsg = "\nWEBINA\n======\n\n";
if (baseUrl !== undefined) {
if (baseUrl.slice(baseUrl.length - 1) !== "/") {
baseUrl += "/";
}
this.WEBINA_BASE_URL = baseUrl;
baseUrlMsg += "User specified baseUrl: " + baseUrl + "\n";
}
else {
baseUrlMsg += "No baseUrl specified, so using ./\n\n";
baseUrlMsg += "Use Webina.start() to specify the baseUrl:\n";
baseUrlMsg += " function start(vinaParams, receptorPDBQTTxt, \n";
baseUrlMsg += " ligandPDBQTTxt, onDone, \n";
baseUrlMsg += " onError, baseUrl)\n";
}
baseUrlMsg += "\nExpecting files at the following locations:\n";
for (var i = 0; i < 5; i++) {
var fileName = ["Webina.min.js", "vina.html.mem",
"vina.min.js", "vina.worker.min.js",
"vina.wasm"][i];
baseUrlMsg += " " + (baseUrl === undefined ? "./" : baseUrl) + fileName + "\n";
}
baseUrlMsg += "\n";
if (baseUrl !== undefined) {
console.log(baseUrlMsg);
}
else {
console.warn(baseUrlMsg);
}
if (onError === undefined) {
onError = function () {
console.log("Webina encountered an error! Does your browser support WebAssembly?");
};
}
// Create a module object for WASM.
WEBINA_Module = {
"preRun": [],
"postRun": [],
"stdOut": "",
"stdErr": "",
"print": function () {
return function (e) {
1 < arguments.length && (e = Array.prototype.slice.call(arguments).join(" ")),
window["WEBINA_Module"]["stdOut"] += e + "\n";
};
}(),
"printErr": function (e) {
// 1 < arguments.length && (e = Array.prototype.slice.call(arguments).join(" ")), console.error(e)
1 < arguments.length && (e = Array.prototype.slice.call(arguments).join(" ")),
window["WEBINA_Module"]["stdErr"] += e + "\n";
},
"setStatus": function (e) {
if (e === "") {
// This happens when it is done running.
if (onDone !== undefined) {
var outTxt = new TextDecoder("utf-8").decode(window["FS"]["readFile"]('ligand_out.pdbqt'));
var stdOut = window["WEBINA_Module"]["stdOut"];
var stdErr = window["WEBINA_Module"]["stdErr"];
onDone(outTxt, stdOut, stdErr);
}
}
},
"onError": onError,
"catchError": function (n) {
onError(n);
// throw n; // Don't throw the errr. You're catching it now.
},
"receptorPDBQTTxt": receptorPDBQTTxt,
"ligandPDBQTTxt": ligandPDBQTTxt
};
if (vinaParams["receptor"] !== undefined) {
console.warn("Webina does not support Vina's --receptor parameter. Instead, pass the content of the receptor file as a string to the webina.start() function.");
}
if (vinaParams["receptor"] !== undefined) {
console.warn("Webina does not support Vina's --ligand parameter. Instead, pass the content of the ligand file as a string to the webina.start() function.");
}
// Receptor and ligand files are always the same.
WEBINA_Module['arguments'] = [
'--receptor', '/receptor.pdbqt',
'--ligand', '/ligand.pdbqt',
];
// For some reason, WebAssembly always uses one more processor
// than specified. Compensate for that here. But sometimes it
// doesn't, so commenting out... Confusing.
// if ((vinaParams["cpu"] !== undefined) && (vinaParams["cpu"] > 1)) {
// vinaParams["cpu"] = vinaParams["cpu"] - 1;
// }
// Add in the remaining values. Note that there is no validation here.
var paramNames = Object.keys(vinaParams);
var paramNamesLen = paramNames.length;
for (var i = 0; i < paramNamesLen; i++) {
var key = paramNames[i];
var val = vinaParams[key];
WEBINA_Module['arguments'].push('--' + key);
if (typeof (val) !== "boolean") {
WEBINA_Module['arguments'].push(String(val));
}
}
window["WEBINA_Module"] = WEBINA_Module;
// Initialize the memory
var memoryInitializer = this.WEBINA_BASE_URL + "vina.html.mem";
memoryInitializer = WEBINA_Module["locateFile"] ? WEBINA_Module["locateFile"](memoryInitializer, "") : memoryInitializer, WEBINA_Module["memoryInitializerRequestURL"] = memoryInitializer;
var meminitXHR = WEBINA_Module["memoryInitializerRequest"] = new XMLHttpRequest;
meminitXHR.onloadend = function () {
if (meminitXHR.status === 404) {
var msg = "Unable to access " + memoryInitializer + ". See JavaScript console for warnings. The \"baseUrl\" variable passed to Webina is likely incorrect.";
WEBINA_Module["catchError"]({ "message": msg });
console.warn(msg);
}
else {
var script = document.createElement("script");
script.src = _this.WEBINA_BASE_URL + "vina.js";
document.body.appendChild(script);
}
};
meminitXHR.open("GET", memoryInitializer, !0);
meminitXHR.responseType = "arraybuffer";
meminitXHR.send(null);
},
isDataURI: function (r) {
return String.prototype.startsWith ? r.startsWith(this.WEBINA_DATA_URI_PREFIX) : 0 === r.indexOf(this.WEBINA_DATA_URI_PREFIX);
},
intArrayFromBase64: function (e) {
if ("boolean" == typeof this.WEBINA_ENVIRONMENT_IS_NODE && this.WEBINA_ENVIRONMENT_IS_NODE) {
var t;
try {
t = Buffer.from(e, "base64");
}
catch (r) {
t = new Buffer(e, "base64");
}
return new Uint8Array(t.buffer, t.byteOffset, t.byteLength);
}
try {
for (var r = decodeBase64(e), a = new Uint8Array(r.length), i = 0; i < r.length; ++i)
a[i] = r.charCodeAt(i);
return a;
}
catch (r) {
throw new Error("Converting base64 string to bytes failed.");
}
},
// Not used?
tryParseAsDataURI: function (r) {
if (this.isDataURI(r))
return this.intArrayFromBase64(r.slice(this.WEBINA_DATA_URI_PREFIX.length));
},
// Not used?
intArrayFromString: function (r, e, t) {
var a = 0 < t ? t : this.WEBINA_lengthBytesUTF8(r) + 1, i = new Array(a), n = this.WEBINA_stringToUTF8Array(r, i, 0, i.length);
return e && (i.length = n), i;
},
// Not used?
intArrayToString: function (r) {
for (var e = [], t = 0; t < r.length; t++) {
var a = r[t];
255 < a && (this.WEBINA_ASSERTIONS && this.WEBINA_assert(!1, "Character code " + a + " (" + String.fromCharCode(a) + ") at offset " + t + " not in 0x00-0xFF."), a &= 255), e.push(String.fromCharCode(a));
}
return e.join("");
}
};
})();
dist/Webina/Webina.min.js deleted 100644 → 0
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/**
* Webina Copyright 2019 Jacob Durrant
*
* Licensed under the Apache License, Version 2.0 (the License);
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an AS IS BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
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$jscomp.defineProperty=$jscomp.ASSUME_ES5||"function"==typeof Object.defineProperties?Object.defineProperty:function(a,c,b){a!=Array.prototype&&a!=Object.prototype&&(a[c]=b.value)};$jscomp.getGlobal=function(a){return"undefined"!=typeof window&&window===a?a:"undefined"!=typeof global&&null!=global?global:a};$jscomp.global=$jscomp.getGlobal(this);$jscomp.SYMBOL_PREFIX="jscomp_symbol_";$jscomp.initSymbol=function(){$jscomp.initSymbol=function(){};$jscomp.global.Symbol||($jscomp.global.Symbol=$jscomp.Symbol)};
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// Copyright 2015 The Emscripten Authors. All rights reserved.
// Emscripten is available under two separate licenses, the MIT license and the
// University of Illinois/NCSA Open Source License. Both these licenses can be
// found in the LICENSE file.
// Pthread Web Worker startup routine:
// This is the entry point file that is loaded first by each Web Worker
// that executes pthreads on the Emscripten application.
// Thread-local:
var threadInfoStruct = 0; // Info area for this thread in Emscripten HEAP (shared). If zero, this worker is not currently hosting an executing pthread.
var selfThreadId = 0; // The ID of this thread. 0 if not hosting a pthread.
var parentThreadId = 0; // The ID of the parent pthread that launched this thread.
var tempDoublePtr = 0; // A temporary memory area for global float and double marshalling operations.
// Thread-local: Each thread has its own allocated stack space.
var STACK_BASE = 0;
var STACKTOP = 0;
var STACK_MAX = 0;
// These are system-wide memory area parameters that are set at main runtime startup in main thread, and stay constant throughout the application.
var buffer; // All pthreads share the same Emscripten HEAP as SharedArrayBuffer with the main execution thread.
var DYNAMICTOP_PTR = 0;
var DYNAMIC_BASE = 0;
var noExitRuntime;
var PthreadWorkerInit = {};
// performance.now() is specced to return a wallclock time in msecs since that Web Worker/main thread launched. However for pthreads this can cause
// subtle problems in emscripten_get_now() as this essentially would measure time from pthread_create(), meaning that the clocks between each threads
// would be wildly out of sync. Therefore sync all pthreads to the clock on the main browser thread, so that different threads see a somewhat
// coherent clock across each of them (+/- 0.1msecs in testing)
var __performance_now_clock_drift = 0;
// Cannot use console.log or console.error in a web worker, since that would risk a browser deadlock! https://bugzilla.mozilla.org/show_bug.cgi?id=1049091
// Therefore implement custom logging facility for threads running in a worker, which queue the messages to main thread to print.
var WEBINA_Module = {};
// These modes need to assign to these variables because of how scoping works in them.
function WEBINA_assert(condition, text) {
if (!condition) abort('Assertion failed: ' + text);
}
// When error objects propagate from Web Worker to main thread, they lose helpful call stack and thread ID information, so print out errors early here,
// before that happens.
this.addEventListener('error', function(e) {
if (e.message.indexOf('SimulateInfiniteLoop') != -1) return e.preventDefault();
var errorSource = ' in ' + e.filename + ':' + e.lineno + ':' + e.colno;
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console.error(e.error);
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function threadPrintErr() {
var text = Array.prototype.slice.call(arguments).join(' ');
console.error(text);
console.error(new Error().stack);
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function threadAlert() {
var text = Array.prototype.slice.call(arguments).join(' ');
postMessage({cmd: 'alert', text: text, threadId: selfThreadId});
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var err = threadPrintErr;
this.alert = threadAlert;
// When using postMessage to send an object, it is processed by the structured clone algorithm.
// The prototype, and hence methods, on that object is then lost. This function adds back the lost prototype.
// This does not work with nested objects that has prototypes, but it suffices for WasmSourceMap and WasmOffsetConverter.
function resetPrototype(constructor, attrs) {
var object = Object.create(constructor.prototype);
for (var key in attrs) {
if (attrs.hasOwnProperty(key)) {
object[key] = attrs[key];
}
}
return object;
}
WEBINA_Module['instantiateWasm'] = function(info, receiveInstance) {
// Instantiate from the module posted from the main thread.
// We can just use sync instantiation in the worker.
var instance = new WebAssembly.Instance(wasmModule, info);
// We don't need the module anymore; new threads will be spawned from the main thread.
wasmModule = null;
receiveInstance(instance); // The second 'module' parameter is intentionally null here, we don't need to keep a ref to the WEBINA_Module object from here.
return instance.exports;
};
var wasmModule;
var wasmMemory;
this.onmessage = function(e) {
try {
if (e.data.cmd === 'load') { // Preload command that is called once per worker to parse and load the Emscripten code.
// Initialize the thread-local field(s):
tempDoublePtr = e.data.tempDoublePtr;
// Initialize the global "process"-wide fields:
DYNAMIC_BASE = e.data.DYNAMIC_BASE;
DYNAMICTOP_PTR = e.data.DYNAMICTOP_PTR;
// The Wasm module will have import fields for STACKTOP and STACK_MAX. At 'load' stage of Worker startup, we are just
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// but the Worker is reused for later spawned pthreads). The 'run' stage below will actually start running a pthread.
// The stack space for a pthread is allocated and deallocated when a pthread is actually run, not yet at Worker 'load' stage.
// However, the WebAssembly module we are loading up here has import fields for STACKTOP and STACK_MAX, which it needs to get filled in
// immediately at Wasm WEBINA_Module instantiation time. The values of these will not get used until pthread is actually running some code, so
// we'll proceed to set up temporary invalid values for these fields for import purposes. Then whenever a pthread is launched at 'run' stage
// below, these values are rewritten to establish proper stack area for the particular pthread.
WEBINA_Module['STACK_MAX'] = WEBINA_Module['STACKTOP'] = 0x7FFFFFFF;
// WEBINA_Module and memory were sent from main thread
wasmModule = e.data.wasmModule;
wasmMemory = e.data.wasmMemory;
buffer = wasmMemory.buffer;
PthreadWorkerInit = e.data.PthreadWorkerInit;
WEBINA_Module['ENVIRONMENT_IS_PTHREAD'] = true;
if (typeof e.data.urlOrBlob === 'string') {
importScripts(e.data.urlOrBlob);
} else {
var objectUrl = URL.createObjectURL(e.data.urlOrBlob);
importScripts(objectUrl);
URL.revokeObjectURL(objectUrl);
}
if (typeof FS !== 'undefined' && typeof FS.createStandardStreams === 'function') FS.createStandardStreams();
postMessage({ cmd: 'loaded' });
} else if (e.data.cmd === 'objectTransfer') {
PThread.receiveObjectTransfer(e.data);
} else if (e.data.cmd === 'run') { // This worker was idle, and now should start executing its pthread entry point.
__performance_now_clock_drift = performance.now() - e.data.time; // Sync up to the clock of the main thread.
threadInfoStruct = e.data.threadInfoStruct;
__register_pthread_ptr(threadInfoStruct, /*isMainBrowserThread=*/0, /*isMainRuntimeThread=*/0); // Pass the thread address inside the asm.js scope to store it for fast access that avoids the need for a FFI out.
selfThreadId = e.data.selfThreadId;
parentThreadId = e.data.parentThreadId;
// Establish the stack frame for this thread in global scope
var max = e.data.stackBase + e.data.stackSize;
var top = e.data.stackBase;
STACK_BASE = top;
STACKTOP = top;
STACK_MAX = max;
WEBINA_assert(threadInfoStruct);
WEBINA_assert(selfThreadId);
WEBINA_assert(parentThreadId);
WEBINA_assert(STACK_BASE != 0);
WEBINA_assert(max > e.data.stackBase);
WEBINA_assert(max > top);
WEBINA_assert(e.data.stackBase === top);
// Call inside asm.js/wasm module to set up the stack frame for this pthread in asm.js/wasm module scope
WEBINA_Module['establishStackSpace'](e.data.stackBase, e.data.stackBase + e.data.stackSize);
writeStackCookie();
PThread.receiveObjectTransfer(e.data);
PThread.setThreadStatus(_pthread_self(), 1/*EM_THREAD_STATUS_RUNNING*/);
try {
// pthread entry points are always of signature 'void *ThreadMain(void *arg)'
// Native codebases sometimes spawn threads with other thread entry point signatures,
// such as void ThreadMain(void *arg), void *ThreadMain(), or void ThreadMain().
// That is not acceptable per C/C++ specification, but x86 compiler ABI extensions
// enable that to work. If you find the following line to crash, either change the signature
// to "proper" void *ThreadMain(void *arg) form, or try linking with the Emscripten linker
// flag -s EMULATE_FUNCTION_POINTER_CASTS=1 to add in emulation for this x86 ABI extension.
var result = WEBINA_Module['dynCall_ii'](e.data.start_routine, e.data.arg);
checkStackCookie();
} catch(e) {
if (e === 'Canceled!') {
PThread.threadCancel();
return;
} else if (e === 'SimulateInfiniteLoop' || e === 'pthread_exit') {
return;
} else {
Atomics.store(HEAPU32, (threadInfoStruct + 4 /*C_STRUCTS.pthread.threadExitCode*/ ) >> 2, (e instanceof ExitStatus) ? e.status : -2 /*A custom entry specific to Emscripten denoting that the thread crashed.*/);
Atomics.store(HEAPU32, (threadInfoStruct + 0 /*C_STRUCTS.pthread.threadStatus*/ ) >> 2, 1); // Mark the thread as no longer running.
if (typeof(_emscripten_futex_wake) !== "function") {
err("Thread Initialisation failed.");
throw e;
}
_emscripten_futex_wake(threadInfoStruct + 0 /*C_STRUCTS.pthread.threadStatus*/, 0x7FFFFFFF/*INT_MAX*/); // Wake all threads waiting on this thread to finish.
if (!(e instanceof ExitStatus)) throw e;
}
}
// The thread might have finished without calling pthread_exit(). If so, then perform the exit operation ourselves.
// (This is a no-op if explicit pthread_exit() had been called prior.)
if (!noExitRuntime) PThread.threadExit(result);
} else if (e.data.cmd === 'cancel') { // Main thread is asking for a pthread_cancel() on this thread.
if (threadInfoStruct && PThread.thisThreadCancelState == 0/*PTHREAD_CANCEL_ENABLE*/) {
PThread.threadCancel();
}
} else if (e.data.target === 'setimmediate') {
// no-op
} else if (e.data.cmd === 'processThreadQueue') {
if (threadInfoStruct) { // If this thread is actually running?
_emscripten_current_thread_process_queued_calls();
}
} else {
err('worker.js received unknown command ' + e.data.cmd);
console.error(e.data);
}
} catch(e) {
console.error('worker.js onmessage() captured an uncaught exception: ' + e);
console.error(e.stack);
throw e;
}
};
dist/Webina/vina.worker.min.js deleted 100644 → 0
View file @ 47bb71f1
var threadInfoStruct=0,selfThreadId=0,parentThreadId=0,tempDoublePtr=0,STACK_BASE=0,STACKTOP=0,STACK_MAX=0,buffer,DYNAMICTOP_PTR=0,DYNAMIC_BASE=0,noExitRuntime,PthreadWorkerInit={},__performance_now_clock_drift=0,WEBINA_Module={};function WEBINA_assert(a,b){a||abort("Assertion failed: "+b)}
this.addEventListener("error",function(a){if(-1!=a.message.indexOf("SimulateInfiniteLoop"))return a.preventDefault();var b=" in "+a.filename+":"+a.lineno+":"+a.colno;console.error("Pthread "+selfThreadId+" uncaught exception"+(a.filename||a.lineno||a.colno?b:"")+": "+a.message+". Error object:");console.error(a.error)});function threadPrintErr(){var a=Array.prototype.slice.call(arguments).join(" ");console.error(a);console.error(Error().stack)}
function threadAlert(){var a=Array.prototype.slice.call(arguments).join(" ");postMessage({cmd:"alert",text:a,threadId:selfThreadId})}var err=threadPrintErr;this.alert=threadAlert;function resetPrototype(a,b){a=Object.create(a.prototype);for(var d in b)b.hasOwnProperty(d)&&(a[d]=b[d]);return a}WEBINA_Module.instantiateWasm=function(a,b){a=new WebAssembly.Instance(wasmModule,a);wasmModule=null;b(a);return a.exports};var wasmModule,wasmMemory;
this.onmessage=function(a){try{if("load"===a.data.cmd){tempDoublePtr=a.data.tempDoublePtr;DYNAMIC_BASE=a.data.DYNAMIC_BASE;DYNAMICTOP_PTR=a.data.DYNAMICTOP_PTR;WEBINA_Module.STACK_MAX=WEBINA_Module.STACKTOP=2147483647;wasmModule=a.data.wasmModule;wasmMemory=a.data.wasmMemory;buffer=wasmMemory.buffer;PthreadWorkerInit=a.data.PthreadWorkerInit;WEBINA_Module.ENVIRONMENT_IS_PTHREAD=!0;if("string"===typeof a.data.urlOrBlob)importScripts(a.data.urlOrBlob);else{var b=URL.createObjectURL(a.data.urlOrBlob);
importScripts(b);URL.revokeObjectURL(b)}"undefined"!==typeof FS&&"function"===typeof FS.createStandardStreams&&FS.createStandardStreams();postMessage({cmd:"loaded"})}else if("objectTransfer"===a.data.cmd)PThread.receiveObjectTransfer(a.data);else if("run"===a.data.cmd){__performance_now_clock_drift=performance.now()-a.data.time;threadInfoStruct=a.data.threadInfoStruct;__register_pthread_ptr(threadInfoStruct,0,0);selfThreadId=a.data.selfThreadId;parentThreadId=a.data.parentThreadId;var d=a.data.stackBase+
a.data.stackSize,e=a.data.stackBase;STACKTOP=STACK_BASE=e;STACK_MAX=d;WEBINA_assert(threadInfoStruct);WEBINA_assert(selfThreadId);WEBINA_assert(parentThreadId);WEBINA_assert(0!=STACK_BASE);WEBINA_assert(d>a.data.stackBase);WEBINA_assert(d>e);WEBINA_assert(a.data.stackBase===e);WEBINA_Module.establishStackSpace(a.data.stackBase,a.data.stackBase+a.data.stackSize);writeStackCookie();PThread.receiveObjectTransfer(a.data);PThread.setThreadStatus(_pthread_self(),1);try{var f=WEBINA_Module.dynCall_ii(a.data.start_routine,
a.data.arg);checkStackCookie()}catch(c){if("Canceled!"===c){PThread.threadCancel();return}if("SimulateInfiniteLoop"===c||"pthread_exit"===c)return;Atomics.store(HEAPU32,threadInfoStruct+4>>2,c instanceof ExitStatus?c.status:-2);Atomics.store(HEAPU32,threadInfoStruct+0>>2,1);if("function"!==typeof _emscripten_futex_wake)throw err("Thread Initialisation failed."),c;_emscripten_futex_wake(threadInfoStruct+0,2147483647);if(!(c instanceof ExitStatus))throw c;}noExitRuntime||PThread.threadExit(f)}else"cancel"===
a.data.cmd?threadInfoStruct&&0==PThread.thisThreadCancelState&&PThread.threadCancel():"setimmediate"!==a.data.target&&("processThreadQueue"===a.data.cmd?threadInfoStruct&&_emscripten_current_thread_process_queued_calls():(err("worker.min.js received unknown command "+a.data.cmd),console.error(a.data)))}catch(c){throw console.error("worker.min.js onmessage() captured an uncaught exception: "+c),console.error(c.stack),c;}};
dist/app.24f544c55bbf0fea1b2d.js deleted 100644 → 0
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dist/bootstrap-vue.min.js deleted 100644 → 0
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dist/index.html
View file @ db3552fd
<!doctype html>
<html lang="en-us">
<html lang="en-us">
<head>
<!--
This file is part of Webina, released under the Apache 2.0
License. See LICENSE.md or go to
https://opensource.org/licenses/Apache-2.0 for full details.
Copyright 2020 Jacob D. Durrant.
-->
<meta charset="utf-8">
<meta content="text/html; charset=utf-8" http-equiv="Content-Type">
<title>Webina</title>
<link rel="shortcut icon" href="favicon.ico"><link href="vendors.24f544c55bbf0fea1b2d.1.css" rel="stylesheet"><link href="styles.24f544c55bbf0fea1b2d.3.css" rel="stylesheet"></head>
<link rel="shortcut icon" href="favicon.ico"><link href="vendors.bada13cfacf3ef663f74.css" rel="stylesheet"><link href="styles.css.bada13cfacf3ef663f74.css" rel="stylesheet"></head>
<body>
<div id="app"></div>
......@@ -19,6 +24,6 @@
<script src="vue.min.js"></script>
<script src="vuex.min.js"></script>
<script src="bootstrap-vue.min.js"></script>
<script type="text/javascript" src="runtime.24f544c55bbf0fea1b2d.js"></script><script type="text/javascript" src="vendors.24f544c55bbf0fea1b2d.js"></script><script type="text/javascript" src="app.24f544c55bbf0fea1b2d.js"></script><script type="text/javascript" src="styles.24f544c55bbf0fea1b2d.js"></script><script type="text/javascript" src="styles.css.24f544c55bbf0fea1b2d.js"></script></body>
<script type="text/javascript" src="runtime.bada13cfacf3ef663f74.js"></script><script type="text/javascript" src="vendors.bada13cfacf3ef663f74.js"></script><script type="text/javascript" src="app.bada13cfacf3ef663f74.js"></script><script type="text/javascript" src="styles.css.bada13cfacf3ef663f74.js"></script></body>
</html>
dist/minimal_example.html deleted 100644 → 0
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dist/runtime.24f544c55bbf0fea1b2d.js deleted 100644 → 0
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(function(m){function p(a){for(var b=a[0],c=a[1],d=a[2],f,h,e=0,g=[];e<b.length;e++)h=b[e],Object.prototype.hasOwnProperty.call(k,h)&&k[h]&&g.push(k[h][0]),k[h]=0;for(f in c)Object.prototype.hasOwnProperty.call(c,f)&&(m[f]=c[f]);for(q&&q(a);g.length;)g.shift()();l.push.apply(l,d||[]);return r()}function r(){for(var a,b=0;b<l.length;b++){for(var n=l[b],d=!0,f=1;f<n.length;f++)0!==k[n[f]]&&(d=!1);d&&(l.splice(b--,1),a=c(c.s=n[0]))}return a}function c(a){if(e[a])return e[a].exports;var b=e[a]={i:a,l:!1,
exports:{}};m[a].call(b.exports,b,b.exports,c);b.l=!0;return b.exports}var e={},k={0:0},l=[];c.m=m;c.c=e;c.d=function(a,b,d){c.o(a,b)||Object.defineProperty(a,b,{enumerable:!0,get:d})};c.r=function(a){"undefined"!==typeof Symbol&&Symbol.toStringTag&&Object.defineProperty(a,Symbol.toStringTag,{value:"Module"});Object.defineProperty(a,"__esModule",{value:!0})};c.t=function(a,b){b&1&&(a=c(a));if(b&8||b&4&&"object"===typeof a&&a&&a.__esModule)return a;var d=Object.create(null);c.r(d);Object.defineProperty(d,