Path to pymol (and perhaps vmd) isn't saved when you enter it via the import dialog.
Hi @ikk6 . I'm in the process of releasing BlendMol for Blender 2.8 (experimental branch you made). The path to the executable(s) only gets saved if you change it via Edit => Preferences => Add-ons. Is it possible to also save the paths if they are changed in the import dialog? Thanks.